STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0015647VOC domain-containing protein. (215 aa)    
Predicted Functional Partners:
chiPu_0013172
B12-binding domain-containing protein.
  
 
 0.933
chiPu_0010797
Uncharacterized protein.
 
 
 0.912
chiPu_0013911
Uncharacterized protein.
  
 
 0.898
chiPu_0024709
METMALONYL_COA_MUTASE domain-containing protein.
  
 
 0.886
chiPu_0028974
CoA carboxyltransferase C-terminal domain-containing protein.
  
 
 0.885
chiPu_0001868
Uncharacterized protein.
  
  0.878
chiPu_0002133
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.874
chiPu_0019835
AMP-binding domain-containing protein.
    
 0.871
chiPu_0013941
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
  
 
 0.825
chiPu_0004624
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.
   
  
 0.810
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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