STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0015849LRRcap domain-containing protein. (299 aa)    
Predicted Functional Partners:
chiPu_0021543
Histone H2A; Belongs to the histone H2A family.
   
 
 0.821
chiPu_0018228
Histone H2A; Belongs to the histone H2A family.
   
 
 0.821
chiPu_0024978
Uncharacterized protein.
   
 
 0.809
chiPu_0021490
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.801
chiPu_0013017
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.801
chiPu_0024278
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.737
chiPu_0005362
Uncharacterized protein.
    
 
 0.712
chiPu_0002389
NifU_N domain-containing protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
 
      0.681
chiPu_0010275
ELAV-like protein; Belongs to the RRM elav family.
   
 0.680
chiPu_0012595
Importin N-terminal domain-containing protein.
   
 0.651
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.