STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0015869PHD domain-containing protein. (436 aa)    
Predicted Functional Partners:
chiPu_0012322
FHA domain-containing protein.
    
 0.925
chiPu_0018286
Uncharacterized protein.
    
 0.905
chiPu_0016975
Uncharacterized protein.
    
 0.905
chiPu_0028583
zf-C3Hc3H domain-containing protein.
    
 0.853
chiPu_0028849
zf-C3Hc3H domain-containing protein.
    
 0.853
chiPu_0031155
Uncharacterized protein.
    
 0.853
chiPu_0014220
SET domain-containing protein.
    
 0.795
chiPu_0019714
WD_REPEATS_REGION domain-containing protein.
    
 0.778
chiPu_0009515
Uncharacterized protein.
   
 0.769
chiPu_0024752
Uncharacterized protein.
   
 0.769
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.