STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0015861Uncharacterized protein. (1304 aa)    
Predicted Functional Partners:
chiPu_0016675
Brix domain-containing protein.
   
 
 0.947
chiPu_0003904
Uncharacterized protein.
   
 
 0.944
chiPu_0022168
Brix domain-containing protein.
   
 
 0.941
chiPu_0029077
Uncharacterized protein.
   
 
 0.941
chiPu_0001904
Uncharacterized protein.
   
 
 0.924
chiPu_0005492
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.918
chiPu_0028811
WD_REPEATS_REGION domain-containing protein.
   
  
 0.912
chiPu_0009473
Uncharacterized protein.
   
 
 0.909
chiPu_0011642
Uncharacterized protein.
   
 
 0.904
chiPu_0011615
Nop domain-containing protein.
   
   0.892
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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