STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0016017Ig-like domain-containing protein; Belongs to the MHC class I family. (352 aa)    
Predicted Functional Partners:
chiPu_0020557
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
   
  0.899
chiPu_0019076
Uncharacterized protein.
   
  0.899
chiPu_0028604
RPA_C domain-containing protein.
   
  0.899
chiPu_0008507
Uncharacterized protein.
   
  0.846
chiPu_0009481
CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication.
   
  0.846
chiPu_0023573
Uncharacterized protein.
   
  0.846
chiPu_0008465
Ig-like domain-containing protein.
   
 0.766
chiPu_0011707
Uncharacterized protein.
    
  0.752
chiPu_0012180
Ig-like domain-containing protein.
  
 
  0.715
chiPu_0019571
Ig-like domain-containing protein; Belongs to the MHC class I family.
  
 
0.711
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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