STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0016110SEC7 domain-containing protein. (921 aa)    
Predicted Functional Partners:
chiPu_0002507
Uncharacterized protein.
    
0.683
chiPu_0006492
Uncharacterized protein.
    
0.683
chiPu_0001003
SEC7 domain-containing protein.
     
0.618
chiPu_0006700
SEC7 domain-containing protein.
     
0.618
chiPu_0013210
Uncharacterized protein.
    
0.613
chiPu_0001958
Uncharacterized protein.
   
 
0.532
chiPu_0008573
Uncharacterized protein.
   
 
0.532
chiPu_0013380
Uncharacterized protein.
   
 
0.532
chiPu_0025952
Uncharacterized protein.
   
 
 0.532
chiPu_0024368
PH domain-containing protein.
     
 0.527
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.