chiPu_0016207 protein (Chiloscyllium punctatum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

chiPu_0016207

Uncharacterized protein. (463 aa)

Predicted Functional Partners:

chiPu_0013988

0.898

chiPu_0017579

0.748

chiPu_0022870

0.748

chiPu_0006843

0.706

chiPu_0011951

0.664

chiPu_0023089

0.664

chiPu_0017060

0.618

chiPu_0008956

0.613

chiPu_0003190

0.571

chiPu_0010687

0.571

Your Current Organism:

Chiloscyllium punctatum

NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
chiPu_0003190	chiPu_0006843	A0A401S352	A0A401SDI4	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Ubiquitin-like domain-containing protein.	0.999
chiPu_0003190	chiPu_0010687	A0A401S352	A0A401SPC0	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Uncharacterized protein.	0.999
chiPu_0003190	chiPu_0016207	A0A401S352	A0A401T4V7	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Uncharacterized protein.	0.571
chiPu_0003190	chiPu_0017579	A0A401S352	A0A401RH78	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Uncharacterized protein.	0.975
chiPu_0003190	chiPu_0022870	A0A401S352	A0A401T9R3	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Uncharacterized protein.	0.975
chiPu_0006843	chiPu_0003190	A0A401SDI4	A0A401S352	Ubiquitin-like domain-containing protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
chiPu_0006843	chiPu_0010687	A0A401SDI4	A0A401SPC0	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.999
chiPu_0006843	chiPu_0016207	A0A401SDI4	A0A401T4V7	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.706
chiPu_0006843	chiPu_0017579	A0A401SDI4	A0A401RH78	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.953
chiPu_0006843	chiPu_0022870	A0A401SDI4	A0A401T9R3	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.953
chiPu_0008956	chiPu_0016207	A0A401SJJ0	A0A401T4V7	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	Uncharacterized protein.	0.613
chiPu_0010687	chiPu_0003190	A0A401SPC0	A0A401S352	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
chiPu_0010687	chiPu_0006843	A0A401SPC0	A0A401SDI4	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.999
chiPu_0010687	chiPu_0016207	A0A401SPC0	A0A401T4V7	Uncharacterized protein.	Uncharacterized protein.	0.571
chiPu_0010687	chiPu_0017579	A0A401SPC0	A0A401RH78	Uncharacterized protein.	Uncharacterized protein.	0.980
chiPu_0010687	chiPu_0022870	A0A401SPC0	A0A401T9R3	Uncharacterized protein.	Uncharacterized protein.	0.980
chiPu_0011951	chiPu_0016207	A0A401SSY8	A0A401T4V7	Cleavage and polyadenylation specificity factor subunit 2.	Uncharacterized protein.	0.664
chiPu_0011951	chiPu_0023089	A0A401SSY8	A0A401T8C4	Cleavage and polyadenylation specificity factor subunit 2.	Cleavage and polyadenylation specificity factor subunit 2.	0.858
chiPu_0013988	chiPu_0016207	A0A401SYP9	A0A401T4V7	Lactamase_B domain-containing protein.	Uncharacterized protein.	0.898
chiPu_0016207	chiPu_0003190	A0A401T4V7	A0A401S352	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.571