STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0016472Uncharacterized protein. (617 aa)    
Predicted Functional Partners:
chiPu_0016950
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.947
chiPu_0004769
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.896
chiPu_0013978
UBX domain-containing protein 7.
    
  0.839
chiPu_0016307
Zf-rbx1 domain-containing protein.
    
 0.829
chiPu_0002380
UDENN FNIP1/2-type domain-containing protein.
    
   0.758
chiPu_0021809
Ubiquitin-like domain-containing protein.
    
  0.756
chiPu_0017122
MPN domain-containing protein.
    
 0.749
chiPu_0010392
COMM domain-containing protein.
   
  0.739
chiPu_0020998
Uncharacterized protein.
    
 0.721
chiPu_0024809
COMM domain-containing protein.
    
  0.708
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.