STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0016556Uncharacterized protein. (784 aa)    
Predicted Functional Partners:
chiPu_0009902
IL6Ra-bind domain-containing protein.
  
     0.461
chiPu_0005209
Ubiquitin_3 domain-containing protein.
  
    0.458
chiPu_0020231
Uncharacterized protein.
  
     0.447
chiPu_0017207
Uncharacterized protein.
  
     0.443
chiPu_0010578
Uncharacterized protein.
  
 
   0.441
chiPu_0012025
RING-type domain-containing protein.
  
     0.437
chiPu_0013459
Uncharacterized protein.
  
     0.417
chiPu_0013141
DUF4683 domain-containing protein.
  
     0.415
chiPu_0010491
Uncharacterized protein.
  
     0.409
chiPu_0004215
Uncharacterized protein.
  
     0.405
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.