STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0016720RING-type domain-containing protein. (489 aa)    
Predicted Functional Partners:
chiPu_0016088
Uncharacterized protein.
    
 
 0.969
chiPu_0004136
VIR_N domain-containing protein.
    
 
 0.932
chiPu_0004137
Uncharacterized protein.
    
 
 0.932
chiPu_0006132
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
    
 
 0.855
chiPu_0001880
SERTA domain-containing protein.
    
   0.744
chiPu_0013936
C3H1-type domain-containing protein.
    
 
 0.694
chiPu_0007678
Uncharacterized protein; Belongs to the MT-A70-like family.
    
 
 0.625
chiPu_0011055
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
  
 0.557
chiPu_0006317
Uncharacterized protein.
    
 
 0.541
chiPu_0010911
Uncharacterized protein.
    
 
 0.541
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.