STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0016852Codanin-1_C domain-containing protein. (1075 aa)    
Predicted Functional Partners:
chiPu_0014025
Uncharacterized protein.
    
 
 0.865
chiPu_0014639
Uncharacterized protein.
   
    0.755
chiPu_0006568
Uncharacterized protein.
    
 
 0.592
chiPu_0017793
Uncharacterized protein.
    
 
 0.514
chiPu_0007603
Uncharacterized protein.
      
 0.487
chiPu_0013284
VWFA domain-containing protein.
      
 0.476
chiPu_0013402
Ion_trans domain-containing protein.
      
 0.438
chiPu_0009605
Fibronectin type-III domain-containing protein.
      
 0.431
chiPu_0014853
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.428
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.