STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0016863Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (313 aa)    
Predicted Functional Partners:
chiPu_0003190
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.915
chiPu_0009262
Ribosomal_L14e domain-containing protein.
   
 
 0.837
chiPu_0007310
Ribosomal_L2_C domain-containing protein.
   
 
 0.812
chiPu_0004565
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 
 0.798
chiPu_0021691
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
   
 
 0.795
chiPu_0017574
Ribosomal_L28e domain-containing protein.
   
   0.793
chiPu_0006144
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
   0.792
chiPu_0019818
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.790
chiPu_0005539
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
   0.786
chiPu_0003608
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 
 0.785
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.