STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0016880Uncharacterized protein. (549 aa)    
Predicted Functional Partners:
chiPu_0020221
PWI domain-containing protein.
 
 
    0.655
chiPu_0016962
Uncharacterized protein.
   
 0.617
chiPu_0001867
Uncharacterized protein.
  
 0.611
chiPu_0010124
Uncharacterized protein.
  
 0.585
chiPu_0001107
Uncharacterized protein.
  
 0.579
chiPu_0000890
Uncharacterized protein.
      
 0.553
chiPu_0000915
Uncharacterized protein.
      
 0.553
chiPu_0003431
Protein S100; Belongs to the S-100 family.
    
 
 0.544
chiPu_0004205
RING-type domain-containing protein.
      
 0.534
chiPu_0016954
Uncharacterized protein.
     
 0.527
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.