STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0017017Anaphylatoxin-like domain-containing protein. (1422 aa)    
Predicted Functional Partners:
chiPu_0027240
Uncharacterized protein.
   
 0.917
chiPu_0019619
Uncharacterized protein.
   
 0.875
chiPu_0003636
Chromo domain-containing protein.
    
 0.874
chiPu_0016610
Uncharacterized protein.
   
 0.863
chiPu_0020298
MACPF domain-containing protein.
   
 0.842
chiPu_0003635
Chromo domain-containing protein.
    
 0.834
chiPu_0008206
RING-type domain-containing protein.
    
 0.829
chiPu_0016046
RING-type domain-containing protein.
    
 0.829
chiPu_0000120
RING-type domain-containing protein.
    
 0.828
chiPu_0015256
RING-type domain-containing protein.
    
 0.828
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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