STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0016958Protein kinase domain-containing protein. (630 aa)    
Predicted Functional Partners:
chiPu_0014025
Uncharacterized protein.
    
 
 0.926
chiPu_0013425
TPR_REGION domain-containing protein.
    
 
 0.732
chiPu_0009742
Uncharacterized protein.
   
   0.565
chiPu_0005632
zf-4CXXC_R1 domain-containing protein.
    
 
 0.489
chiPu_0007077
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 
 0.470
chiPu_0020140
RAP80_UIM domain-containing protein.
   
  
 0.425
chiPu_0024546
FHA domain-containing protein.
    
 
 0.415
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.