STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0017254Uncharacterized protein. (595 aa)    
Predicted Functional Partners:
chiPu_0004469
Uncharacterized protein; Belongs to the peptidase C19 family.
    
 
 0.950
chiPu_0006843
Ubiquitin-like domain-containing protein.
   
  0.945
chiPu_0018634
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.939
chiPu_0020504
Ubiquitin-like domain-containing protein.
    
 0.907
chiPu_0018724
Uncharacterized protein.
    
 0.867
chiPu_0023008
53-BP1_Tudor domain-containing protein.
    
 0.867
chiPu_0022782
Uncharacterized protein.
    
 0.867
chiPu_0024174
BRCT domain-containing protein.
    
 0.867
chiPu_0027236
Uncharacterized protein.
    
 0.867
chiPu_0008136
Uncharacterized protein.
    
 0.845
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.