STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0023169Uncharacterized protein. (84 aa)    
Predicted Functional Partners:
chiPu_0000835
Uncharacterized protein.
    
   0.736
chiPu_0007099
TLC domain-containing protein.
    
   0.711
chiPu_0003122
AMP-binding domain-containing protein.
      
 0.523
chiPu_0008386
MIT domain-containing protein.
      
 0.487
chiPu_0014184
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
    
 
 0.463
chiPu_0017067
Uncharacterized protein.
      
 0.449
chiPu_0013462
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
      
 0.429
chiPu_0009352
Sulfiredoxin.
      
 0.410
chiPu_0004649
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
    
 
 0.404
chiPu_0017791
Spatacsin_C domain-containing protein.
      
 0.400
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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