chiPu_0023209 protein (Chiloscyllium punctatum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

chiPu_0023209

Uncharacterized protein. (83 aa)

Predicted Functional Partners:

chiPu_0010246

0.995

chiPu_0011892

0.995

chiPu_0012154

0.994

chiPu_0014001

0.985

chiPu_0020096

0.981

chiPu_0016413

0.978

chiPu_0028011

0.976

chiPu_0018892

0.974

chiPu_0020275

0.971

chiPu_0001179

0.969

Your Current Organism:

Chiloscyllium punctatum

NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
chiPu_0001179	chiPu_0010246	A0A401RXG8	A0A401SN15	Uncharacterized protein.	Uncharacterized protein.	0.958
chiPu_0001179	chiPu_0011892	A0A401RXG8	A0A401SST5	Uncharacterized protein.	Uncharacterized protein.	0.973
chiPu_0001179	chiPu_0012154	A0A401RXG8	A0A401STF7	Uncharacterized protein.	RRM domain-containing protein.	0.936
chiPu_0001179	chiPu_0014001	A0A401RXG8	A0A401SYX1	Uncharacterized protein.	Transcription elongation factor SPT5.	0.982
chiPu_0001179	chiPu_0016413	A0A401RXG8	A0A401T5N6	Uncharacterized protein.	Uncharacterized protein.	0.999
chiPu_0001179	chiPu_0018892	A0A401RXG8	A0A401RQ50	Uncharacterized protein.	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	0.994
chiPu_0001179	chiPu_0020096	A0A401RXG8	A0A401RU29	Uncharacterized protein.	RPOLD domain-containing protein.	0.999
chiPu_0001179	chiPu_0020275	A0A401RXG8	A0A401RUG9	Uncharacterized protein.	TFIIS-type domain-containing protein; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.994
chiPu_0001179	chiPu_0023209	A0A401RXG8	A0A401T9F8	Uncharacterized protein.	Uncharacterized protein.	0.969
chiPu_0001179	chiPu_0028011	A0A401RXG8	A0A401TN93	Uncharacterized protein.	Uncharacterized protein.	0.980
chiPu_0010246	chiPu_0001179	A0A401SN15	A0A401RXG8	Uncharacterized protein.	Uncharacterized protein.	0.958
chiPu_0010246	chiPu_0011892	A0A401SN15	A0A401SST5	Uncharacterized protein.	Uncharacterized protein.	0.997
chiPu_0010246	chiPu_0012154	A0A401SN15	A0A401STF7	Uncharacterized protein.	RRM domain-containing protein.	0.994
chiPu_0010246	chiPu_0014001	A0A401SN15	A0A401SYX1	Uncharacterized protein.	Transcription elongation factor SPT5.	0.979
chiPu_0010246	chiPu_0016413	A0A401SN15	A0A401T5N6	Uncharacterized protein.	Uncharacterized protein.	0.962
chiPu_0010246	chiPu_0018892	A0A401SN15	A0A401RQ50	Uncharacterized protein.	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	0.967
chiPu_0010246	chiPu_0020096	A0A401SN15	A0A401RU29	Uncharacterized protein.	RPOLD domain-containing protein.	0.967
chiPu_0010246	chiPu_0020275	A0A401SN15	A0A401RUG9	Uncharacterized protein.	TFIIS-type domain-containing protein; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.957
chiPu_0010246	chiPu_0023209	A0A401SN15	A0A401T9F8	Uncharacterized protein.	Uncharacterized protein.	0.995
chiPu_0010246	chiPu_0028011	A0A401SN15	A0A401TN93	Uncharacterized protein.	Uncharacterized protein.	0.966