STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0022867Uncharacterized protein. (79 aa)    
Predicted Functional Partners:
chiPu_0008236
SAP domain-containing protein.
    
 
 0.685
chiPu_0015206
Exonuclease domain-containing protein.
    
 
 0.609
chiPu_0016879
Uncharacterized protein; Belongs to the argonaute family.
   
 
 0.560
chiPu_0015656
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.
    
 
 0.549
chiPu_0018452
Uncharacterized protein; Belongs to the argonaute family.
   
 
 0.536
chiPu_0000737
Piwi domain-containing protein.
   
 
 0.536
chiPu_0000738
PAZ domain-containing protein.
   
 
 0.536
chiPu_0024532
Piwi domain-containing protein.
   
 
 0.536
chiPu_0020090
Uncharacterized protein.
      
 0.530
chiPu_0004945
Uncharacterized protein.
   
  
 0.526
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.