STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0023847Uncharacterized protein. (50 aa)    
Predicted Functional Partners:
chiPu_0002188
Uncharacterized protein.
    
 0.778
PAFAH1B1
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family.
    
 0.778
chiPu_0015601
Dynein light chain.
    
 0.743
chiPu_0003607
Uncharacterized protein.
   
 0.712
chiPu_0022906
Uncharacterized protein.
    
 0.711
chiPu_0010131
Dynein light chain roadblock.
   
 0.703
chiPu_0023057
Robl_LC7 domain-containing protein.
    
 0.701
chiPu_0008424
Dynein light chain.
    
 0.685
chiPu_0030099
Urease domain-containing protein; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
    
 0.685
chiPu_0032288
Urease_alpha domain-containing protein.
    
 0.685
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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