chiPu_0023742 protein (Chiloscyllium punctatum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

chiPu_0023742

Uncharacterized protein. (58 aa)

Predicted Functional Partners:

chiPu_0004027

0.949

chiPu_0014968

0.886

chiPu_0017452

0.810

chiPu_0012959

0.763

chiPu_0026341

0.763

chiPu_0029460

0.761

chiPu_0000209

0.749

chiPu_0022147

0.745

chiPu_0010570

0.745

chiPu_0006464

0.699

Your Current Organism:

Chiloscyllium punctatum

NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
chiPu_0000209	chiPu_0023742	A0A401RUI3	A0A401TBJ3	tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]	Uncharacterized protein.	0.749
chiPu_0004027	chiPu_0006464	A0A401S5E8	A0A401SCB1	Uncharacterized protein.	Uncharacterized protein.	0.998
chiPu_0004027	chiPu_0010570	A0A401S5E8	A0A401SNZ9	Uncharacterized protein.	Uncharacterized protein.	0.996
chiPu_0004027	chiPu_0012959	A0A401S5E8	A0A401SVR3	Uncharacterized protein.	Uncharacterized protein.	0.996
chiPu_0004027	chiPu_0014968	A0A401S5E8	A0A401T1H4	Uncharacterized protein.	Uncharacterized protein.	0.984
chiPu_0004027	chiPu_0017452	A0A401S5E8	A0A401RG49	Uncharacterized protein.	Uncharacterized protein.	0.998
chiPu_0004027	chiPu_0022147	A0A401S5E8	A0A401RL41	Uncharacterized protein.	Uncharacterized protein.	0.996
chiPu_0004027	chiPu_0023742	A0A401S5E8	A0A401TBJ3	Uncharacterized protein.	Uncharacterized protein.	0.949
chiPu_0004027	chiPu_0026341	A0A401S5E8	A0A401TI53	Uncharacterized protein.	WH2 domain-containing protein.	0.996
chiPu_0004027	chiPu_0029460	A0A401S5E8	A0A401TRY9	Uncharacterized protein.	Uncharacterized protein.	0.996
chiPu_0006464	chiPu_0004027	A0A401SCB1	A0A401S5E8	Uncharacterized protein.	Uncharacterized protein.	0.998
chiPu_0006464	chiPu_0010570	A0A401SCB1	A0A401SNZ9	Uncharacterized protein.	Uncharacterized protein.	0.903
chiPu_0006464	chiPu_0012959	A0A401SCB1	A0A401SVR3	Uncharacterized protein.	Uncharacterized protein.	0.903
chiPu_0006464	chiPu_0014968	A0A401SCB1	A0A401T1H4	Uncharacterized protein.	Uncharacterized protein.	0.996
chiPu_0006464	chiPu_0017452	A0A401SCB1	A0A401RG49	Uncharacterized protein.	Uncharacterized protein.	0.531
chiPu_0006464	chiPu_0022147	A0A401SCB1	A0A401RL41	Uncharacterized protein.	Uncharacterized protein.	0.903
chiPu_0006464	chiPu_0023742	A0A401SCB1	A0A401TBJ3	Uncharacterized protein.	Uncharacterized protein.	0.699
chiPu_0006464	chiPu_0026341	A0A401SCB1	A0A401TI53	Uncharacterized protein.	WH2 domain-containing protein.	0.903
chiPu_0006464	chiPu_0029460	A0A401SCB1	A0A401TRY9	Uncharacterized protein.	Uncharacterized protein.	0.903
chiPu_0010570	chiPu_0004027	A0A401SNZ9	A0A401S5E8	Uncharacterized protein.	Uncharacterized protein.	0.996