STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0024417Ubiquitin-like domain-containing protein. (55 aa)    
Predicted Functional Partners:
chiPu_0001117
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.996
chiPu_0013978
UBX domain-containing protein 7.
    
 0.996
chiPu_0003185
Helicase C-terminal domain-containing protein.
   
 0.992
chiPu_0003187
Helicase ATP-binding domain-containing protein.
   
 0.992
chiPu_0017501
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.987
chiPu_0001524
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.987
chiPu_0004910
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.986
chiPu_0021691
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
   
 0.985
chiPu_0015803
Uncharacterized protein.
   
 0.985
chiPu_0001718
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
  0.984
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.