STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0024058Amino acid transporter. (105 aa)    
Predicted Functional Partners:
chiPu_0020144
Amino acid transporter.
 
     0.937
chiPu_0032044
Amino acid transporter.
  
 
  0.788
chiPu_0001784
Amino acid transporter.
  
 
 
0.742
chiPu_0001815
Amino acid transporter.
  
  
 
0.694
chiPu_0015528
Amino acid transporter.
  
 
 
0.668
chiPu_0007759
Amino acid transporter.
  
 
 
0.664
chiPu_0004550
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
    
 0.659
chiPu_0011223
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
    
 0.659
chiPu_0003529
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
   
 
 0.607
chiPu_0003875
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
    
 0.601
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.