STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0025937Uncharacterized protein. (93 aa)    
Predicted Functional Partners:
chiPu_0008251
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.796
chiPu_0002760
MPN domain-containing protein.
    
  0.751
chiPu_0001853
Uncharacterized protein.
    
 0.736
chiPu_0005313
CARD domain-containing protein.
    
  0.719
chiPu_0014116
Uncharacterized protein; Belongs to the peptidase C14A family.
    
  0.719
chiPu_0017065
Uncharacterized protein.
    
  0.703
chiPu_0027627
Uncharacterized protein.
     
 0.671
chiPu_0009336
ACB domain-containing protein.
    
  0.664
chiPu_0025503
Uncharacterized protein.
    
  0.664
chiPu_0002432
IFT81_CH domain-containing protein.
    
 0.643
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.