STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0025780Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (71 aa)    
Predicted Functional Partners:
chiPu_0012239
Uncharacterized protein.
    
 0.985
chiPu_0026436
Uncharacterized protein.
    
 0.985
chiPu_0003440
Uncharacterized protein.
   
 0.979
chiPu_0019383
Uncharacterized protein.
    
 0.971
chiPu_0008470
Uncharacterized protein.
   
 0.971
chiPu_0019192
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.964
chiPu_0015428
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.964
chiPu_0000048
BRO1 domain-containing protein.
    
 0.949
chiPu_0019348
BRO1 domain-containing protein.
    
 0.949
chiPu_0019349
Hr1 domain-containing protein.
    
 0.949
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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