STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0025783Uncharacterized protein. (53 aa)    
Predicted Functional Partners:
chiPu_0025757
Uncharacterized protein.
     
 0.796
chiPu_0033615
ATPase_AAA_core domain-containing protein; Belongs to the AAA ATPase family.
     
 0.796
chiPu_0024810
Uncharacterized protein.
     
 0.749
chiPu_0025054
ATPase_AAA_core domain-containing protein.
     
 0.749
chiPu_0012598
Uncharacterized protein.
     
 0.711
chiPu_0018179
RING-type domain-containing protein.
     
 0.584
chiPu_0006291
WD_REPEATS_REGION domain-containing protein.
     
 0.584
chiPu_0006454
SH3 domain-containing protein.
     
 0.581
chiPu_0014778
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.576
chiPu_0020000
Peroxisomal membrane protein PEX16.
     
 0.575
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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