STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0025751Uncharacterized protein. (43 aa)    
Predicted Functional Partners:
chiPu_0002295
Uncharacterized protein.
   
 0.970
chiPu_0013985
WD_REPEATS_REGION domain-containing protein.
    
 0.967
chiPu_0015685
CPSF_A domain-containing protein.
    
 0.967
chiPu_0010173
Suf domain-containing protein.
    
 0.966
chiPu_0002755
RRM domain-containing protein.
   
 0.965
chiPu_0000784
CID domain-containing protein.
    
 0.964
chiPu_0011951
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.941
chiPu_0023089
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.941
chiPu_0003101
Fip1 domain-containing protein.
    
 0.934
chiPu_0006326
Fip1 domain-containing protein.
    
 0.934
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.