STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0026063PDZ domain-containing protein. (128 aa)    
Predicted Functional Partners:
chiPu_0001117
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.885
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.847
chiPu_0007498
Protein kinase domain-containing protein.
    
 0.843
chiPu_0021042
NACHT domain-containing protein.
    
 0.831
chiPu_0021043
NLRC4_HD domain-containing protein.
    
 0.831
chiPu_0019369
Uncharacterized protein.
    
 0.831
chiPu_0005813
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 0.831
chiPu_0006315
Uncharacterized protein.
    
 0.831
chiPu_0013347
Uncharacterized protein.
    
 0.831
chiPu_0016732
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 0.831
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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