STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0026071Uncharacterized protein. (76 aa)    
Predicted Functional Partners:
chiPu_0002671
Small nuclear ribonucleoprotein Sm D3.
   
 0.837
chiPu_0008008
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 0.834
chiPu_0012935
Small nuclear ribonucleoprotein Sm D2.
   
 0.755
chiPu_0014792
Uncharacterized protein.
  
 0.754
chiPu_0032682
ENDO3c domain-containing protein.
  
 0.754
chiPu_0005354
Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.
   
 0.752
chiPu_0027331
Sm domain-containing protein.
   
 0.744
chiPu_0001502
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.737
chiPu_0027843
PCNA_N domain-containing protein.
  
 0.737
chiPu_0019131
Small nuclear ribonucleoprotein G.
    
 0.729
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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