STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0026121Uncharacterized protein. (80 aa)    
Predicted Functional Partners:
chiPu_0009390
CPSF_A domain-containing protein.
    
 
 0.837
chiPu_0017409
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
   
 
 0.794
chiPu_0011022
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
   
 
 0.761
chiPu_0015963
Uncharacterized protein.
  
  
  0.679
chiPu_0019198
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 
 0.662
chiPu_0007954
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 
 0.662
chiPu_0018751
Uncharacterized protein; Belongs to the transient receptor (TC 1.A.4) family.
    
  0.498
chiPu_0024193
Death domain-containing protein.
    
 
 0.496
chiPu_0016756
Uncharacterized protein.
   
  
 0.484
chiPu_0005724
Uncharacterized protein.
    
 
 0.447
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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