STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0027040SNF2_N domain-containing protein. (226 aa)    
Predicted Functional Partners:
chiPu_0001115
Uncharacterized protein.
  
 0.929
chiPu_0016798
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.927
chiPu_0016838
Uncharacterized protein.
   
 0.919
chiPu_0005124
Serine/threonine-protein kinase PLK.
   
 0.915
chiPu_0005542
Serine/threonine-protein kinase PLK.
   
 0.915
chiPu_0014654
Serine/threonine-protein kinase PLK.
   
 0.915
chiPu_0001682
Uncharacterized protein; Belongs to the actin family.
    
 0.909
chiPu_0001502
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.907
chiPu_0027843
PCNA_N domain-containing protein.
  
 0.898
chiPu_0003185
Helicase C-terminal domain-containing protein.
   
 0.890
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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