STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0027307Uncharacterized protein. (223 aa)    
Predicted Functional Partners:
chiPu_0007531
Sas10 domain-containing protein.
   
   0.959
chiPu_0009292
Uncharacterized protein.
   
 
 0.958
chiPu_0009594
Uncharacterized protein.
   
 
 0.946
chiPu_0011615
Nop domain-containing protein.
   
   0.943
chiPu_0019194
Uncharacterized protein.
   
 
 0.941
chiPu_0003579
RNA helicase.
   
 
 0.896
chiPu_0001106
CBF domain-containing protein.
   
 
 0.886
chiPu_0009473
Uncharacterized protein.
   
 
 0.870
chiPu_0001471
PP1-binding domain-containing protein.
   
 
 0.862
chiPu_0002037
Uncharacterized protein.
   
 
 0.860
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.