STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0027748Flavokinase domain-containing protein. (298 aa)    
Predicted Functional Partners:
chiPu_0029996
AB hydrolase-1 domain-containing protein.
  
 
 0.883
chiPu_0026057
PAPS_reduct domain-containing protein.
   
 0.881
chiPu_0029737
MoCF_biosynth domain-containing protein.
   
 0.881
chiPu_0031763
FMN_red domain-containing protein.
    
 0.873
chiPu_0008479
Uncharacterized protein.
  
 
 0.872
chiPu_0019103
Nitroreductase domain-containing protein.
    
 0.855
chiPu_0032099
Nitroreductase domain-containing protein.
    
 0.855
chiPu_0018009
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
   
 0.831
chiPu_0015542
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
   
 0.831
chiPu_0015470
Protein-S-isoprenylcysteine O-methyltransferase.
     
 0.824
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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