STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0028027GP-PDE domain-containing protein. (262 aa)    
Predicted Functional Partners:
chiPu_0028185
GP-PDE domain-containing protein.
 
     0.949
chiPu_0009423
Phospholipase A2.
   
 
 0.823
chiPu_0015507
Uncharacterized protein.
   
 0.793
chiPu_0020182
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
    
  0.772
chiPu_0000437
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.760
chiPu_0029638
Uncharacterized protein.
  
 0.760
chiPu_0033197
Uncharacterized protein.
  
 0.760
chiPu_0002064
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 0.752
chiPu_0019453
Uncharacterized protein.
    
 0.733
chiPu_0015056
Uncharacterized protein.
    
 0.733
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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