STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0028634Uncharacterized protein. (334 aa)    
Predicted Functional Partners:
chiPu_0002470
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.
   
 
 0.678
chiPu_0011474
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.
   
 
 0.678
chiPu_0028679
Toprim domain-containing protein.
   
 
 0.678
chiPu_0031177
TOP4c domain-containing protein.
   
 
 0.678
chiPu_0006303
Poly [ADP-ribose] polymerase.
    
  0.575
chiPu_0006304
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.575
chiPu_0009889
PARP catalytic domain-containing protein.
    
  0.575
chiPu_0027251
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.575
chiPu_0028939
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.575
chiPu_0029288
PK domain-containing protein.
    
  0.575
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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