STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0029057Uncharacterized protein. (172 aa)    
Predicted Functional Partners:
chiPu_0002371
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.983
chiPu_0008558
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.983
chiPu_0003190
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.962
chiPu_0010687
Uncharacterized protein.
    
 0.955
chiPu_0024417
Ubiquitin-like domain-containing protein.
    
 0.953
chiPu_0000949
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.940
chiPu_0007228
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.940
chiPu_0012508
Cullin domain-containing protein; Belongs to the cullin family.
    
 0.940
chiPu_0021809
Ubiquitin-like domain-containing protein.
    
 0.924
chiPu_0007745
Uncharacterized protein.
    
 0.923
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.