STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0030507ABC transmembrane type-1 domain-containing protein. (245 aa)    
Predicted Functional Partners:
chiPu_0033075
ABC transmembrane type-1 domain-containing protein.
  
     0.533
chiPu_0030804
ABC transmembrane type-1 domain-containing protein.
  
     0.530
chiPu_0031214
SBP_bac_5 domain-containing protein.
  
     0.518
chiPu_0032757
ABC transporter domain-containing protein.
  
     0.504
chiPu_0031966
oligo_HPY domain-containing protein.
  
     0.503
chiPu_0033043
ABC transporter domain-containing protein.
  
     0.491
chiPu_0026031
SBP_bac_5 domain-containing protein.
  
     0.483
chiPu_0032607
oligo_HPY domain-containing protein.
  
     0.431
chiPu_0030729
oligo_HPY domain-containing protein.
  
     0.425
chiPu_0033745
ABC transporter domain-containing protein.
  
     0.411
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.