STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0031532CheW-like domain-containing protein. (215 aa)    
Predicted Functional Partners:
chiPu_0033855
Uncharacterized protein.
 
  
 0.955
chiPu_0032686
CheR-type methyltransferase domain-containing protein.
 
  
 0.929
chiPu_0000311
Zinc-hook domain-containing protein.
    
  0.675
chiPu_0013123
ATP-synt_DE_N domain-containing protein.
   
 
 0.617
chiPu_0029502
Uncharacterized protein.
  
     0.538
chiPu_0031126
Methyl-accepting transducer domain-containing protein.
  
     0.538
chiPu_0031076
CheW-like domain-containing protein.
  
     0.535
chiPu_0029258
Uncharacterized protein.
  
     0.523
chiPu_0033999
ATP-synt_ab_N domain-containing protein.
 
   
 0.466
chiPu_0014971
Uncharacterized protein.
     
 0.441
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.