STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0031643Uncharacterized protein. (212 aa)    
Predicted Functional Partners:
chiPu_0012837
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.946
chiPu_0031591
MutS_I domain-containing protein.
  
 0.946
chiPu_0000056
DNA_mis_repair domain-containing protein.
    
 0.943
chiPu_0030713
DNA_mis_repair domain-containing protein.
    
 0.943
chiPu_0001115
Uncharacterized protein.
   
 0.941
chiPu_0017112
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.932
chiPu_0029379
Uncharacterized protein.
  
 0.932
chiPu_0031958
MUTSd domain-containing protein.
  
 0.932
chiPu_0010218
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.925
chiPu_0014245
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.925
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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