STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0033757Sod_Fe_C domain-containing protein. (120 aa)    
Predicted Functional Partners:
chiPu_0000469
Sod_Cu domain-containing protein.
  
 0.963
chiPu_0000468
Sod_Cu domain-containing protein.
  
 0.963
chiPu_0000467
Sod_Cu domain-containing protein.
  
 0.963
chiPu_0000471
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
  
 0.960
chiPu_0004817
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
  
 0.960
chiPu_0002611
Sulfurtransferase.
  
 
 0.940
chiPu_0004308
Ribosomal_L18e/L15P domain-containing protein.
  
 
 0.931
chiPu_0009259
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
  
 
 0.928
chiPu_0016083
Catalase domain-containing protein.
  
 0.927
chiPu_0011851
Uncharacterized protein.
   
 
 0.926
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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