STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY48820.1Hypothetical protein. (317 aa)    
Predicted Functional Partners:
SDY48841.1
Transcriptional regulator, PadR family.
 
     0.962
SDZ47067.1
Amino acid adenylation domain-containing protein.
  
 0.891
SDZ47170.1
Non-ribosomal peptide synthetase component F.
  
 0.891
SDZ47182.1
Acyl transferase domain-containing protein.
  
 0.780
SDZ44098.1
Polyketide synthase 2/polyketide synthase 5.
   
 0.766
SDZ47155.1
Acyl transferase domain-containing protein.
   
 0.766
SDZ59863.1
Non-ribosomal peptide synthase domain TIGR01720.
  
 
 0.732
SDZ59830.1
PfaB family protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 0.701
SDZ46930.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
    
 0.649
SDZ46906.1
Natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
  
 
 0.619
Your Current Organism:
Asanoa ishikariensis
NCBI taxonomy Id: 137265
Other names: A. ishikariensis, Asanoa ishikariensis Lee and Hah 2002, Catellatispora ishikariense, Catellatospora ishikariense, DSM 44718, IFO 14551, IMSNU 22004, JCM 11895, NBRC 14551, strain 6432-C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.