Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY52978.1 | SDY53163.1 | SAMN05421684_0213 | SAMN05421684_0222 | PAS/PAC sensor signal transduction histidine kinase. | ABC-2 type transport system permease protein. | 0.697 |
SDY52978.1 | SDY56023.1 | SAMN05421684_0213 | SAMN05421684_0361 | PAS/PAC sensor signal transduction histidine kinase. | Hypothetical protein. | 0.410 |
SDY52978.1 | SDY61048.1 | SAMN05421684_0213 | SAMN05421684_0621 | PAS/PAC sensor signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.999 |
SDY52978.1 | SDZ16138.1 | SAMN05421684_0213 | SAMN05421684_3133 | PAS/PAC sensor signal transduction histidine kinase. | Hypothetical protein. | 0.487 |
SDY53141.1 | SDY53163.1 | SAMN05421684_0221 | SAMN05421684_0222 | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | ABC-2 type transport system permease protein. | 0.850 |
SDY53141.1 | SDY53179.1 | SAMN05421684_0221 | SAMN05421684_0223 | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | ABC-2 type transport system ATP-binding protein. | 0.791 |
SDY53141.1 | SDY53202.1 | SAMN05421684_0221 | SAMN05421684_0224 | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | Na+(or H+)/acetate symporter ActP; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.686 |
SDY53141.1 | SDY53224.1 | SAMN05421684_0221 | SAMN05421684_0225 | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | Uncharacterized membrane protein, DUF485 family. | 0.729 |
SDY53163.1 | SDY52978.1 | SAMN05421684_0222 | SAMN05421684_0213 | ABC-2 type transport system permease protein. | PAS/PAC sensor signal transduction histidine kinase. | 0.697 |
SDY53163.1 | SDY53141.1 | SAMN05421684_0222 | SAMN05421684_0221 | ABC-2 type transport system permease protein. | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | 0.850 |
SDY53163.1 | SDY53179.1 | SAMN05421684_0222 | SAMN05421684_0223 | ABC-2 type transport system permease protein. | ABC-2 type transport system ATP-binding protein. | 0.949 |
SDY53163.1 | SDY53202.1 | SAMN05421684_0222 | SAMN05421684_0224 | ABC-2 type transport system permease protein. | Na+(or H+)/acetate symporter ActP; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.764 |
SDY53163.1 | SDY53224.1 | SAMN05421684_0222 | SAMN05421684_0225 | ABC-2 type transport system permease protein. | Uncharacterized membrane protein, DUF485 family. | 0.733 |
SDY53163.1 | SDY56023.1 | SAMN05421684_0222 | SAMN05421684_0361 | ABC-2 type transport system permease protein. | Hypothetical protein. | 0.678 |
SDY53163.1 | SDY61048.1 | SAMN05421684_0222 | SAMN05421684_0621 | ABC-2 type transport system permease protein. | Signal transduction histidine kinase. | 0.679 |
SDY53163.1 | SDY86085.1 | SAMN05421684_0222 | SAMN05421684_1955 | ABC-2 type transport system permease protein. | ABC-2 type transport system ATP-binding protein. | 0.776 |
SDY53163.1 | SDZ16138.1 | SAMN05421684_0222 | SAMN05421684_3133 | ABC-2 type transport system permease protein. | Hypothetical protein. | 0.706 |
SDY53163.1 | SDZ20563.1 | SAMN05421684_0222 | SAMN05421684_3459 | ABC-2 type transport system permease protein. | ABC-2 type transport system ATP-binding protein. | 0.767 |
SDY53179.1 | SDY53141.1 | SAMN05421684_0223 | SAMN05421684_0221 | ABC-2 type transport system ATP-binding protein. | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | 0.791 |
SDY53179.1 | SDY53163.1 | SAMN05421684_0223 | SAMN05421684_0222 | ABC-2 type transport system ATP-binding protein. | ABC-2 type transport system permease protein. | 0.949 |
page 1 of 2