STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY54283.1CAAX protease self-immunity; Manually curated. (257 aa)    
Predicted Functional Partners:
SDY54258.1
Hypothetical protein.
       0.651
SDZ51204.1
Ribosomal protein S12 methylthiotransferase accessory factor.
  
  
 0.626
SDY92622.1
PucR C-terminal helix-turn-helix domain-containing protein.
  
     0.526
SDY68953.1
Acyl dehydratase; Belongs to the UPF0336 family.
  
     0.516
SDY78982.1
ABC-2 type transport system permease protein.
 
 
  0.505
SDZ13732.1
Sugar phosphate isomerase/epimerase; Manually curated.
 
     0.502
SDZ66014.1
Protein of unknown function.
  
     0.490
SDY93621.1
Hypothetical protein.
  
     0.453
SDY54242.1
NAD(P)H-flavin reductase; Belongs to the globin family.
       0.439
SDY92604.1
[acyl-carrier-protein] S-malonyltransferase.
  
     0.409
Your Current Organism:
Asanoa ishikariensis
NCBI taxonomy Id: 137265
Other names: A. ishikariensis, Asanoa ishikariensis Lee and Hah 2002, Catellatispora ishikariense, Catellatospora ishikariense, DSM 44718, IFO 14551, IMSNU 22004, JCM 11895, NBRC 14551, strain 6432-C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.