STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY55221.1DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. (1322 aa)    
Predicted Functional Partners:
SDY55177.1
Type VII secretion integral membrane protein EccD.
 
 
 0.991
SDY55247.1
WXG100 family type VII secretion target; Belongs to the WXG100 family.
 
 
 
 0.974
SDY55263.1
WXG100 family type VII secretion target; Belongs to the WXG100 family.
 
 
 
 0.925
SDY62742.1
WXG100 family type VII secretion target; Manually curated; Belongs to the WXG100 family.
   
 
 0.925
SDZ66411.1
Type VII secretion integral membrane protein EccD.
 
 
 0.906
SDY55118.1
Type VII secretion protein EccB.
 
 
 0.902
SDY62722.1
Type VII secretion protein EccB.
 
 
 0.901
SDY62763.1
WXG100 family type VII secretion target; Belongs to the WXG100 family.
 
 
 
 0.794
SDY55195.1
Transposase, IS605 OrfB family, central region.
       0.709
ftsQ
Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
 
 0.687
Your Current Organism:
Asanoa ishikariensis
NCBI taxonomy Id: 137265
Other names: A. ishikariensis, Asanoa ishikariensis Lee and Hah 2002, Catellatispora ishikariense, Catellatospora ishikariense, DSM 44718, IFO 14551, IMSNU 22004, JCM 11895, NBRC 14551, strain 6432-C
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