STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY68184.1Heme oxygenase. (214 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
 
  
 0.920
SDZ32334.1
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA).
    
 0.835
SDZ47516.1
Multicopper oxidase.
    
 0.696
SDZ27883.1
Iron (metal) dependent repressor, DtxR family.
      
 0.612
SDY62134.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
    
 
 0.595
SDZ36013.1
Ferredoxin-NADP reductase.
    
 
 0.595
SDZ64556.1
Propane monooxygenase reductase subunit.
    
 
 0.595
SDY61152.1
Thiol-disulfide isomerase or thioredoxin.
      
 0.566
SDY68155.1
Methyltransferase domain-containing protein.
       0.548
SDY68171.1
L-ascorbate metabolism protein UlaG, beta-lactamase superfamily.
       0.548
Your Current Organism:
Asanoa ishikariensis
NCBI taxonomy Id: 137265
Other names: A. ishikariensis, Asanoa ishikariensis Lee and Hah 2002, Catellatispora ishikariense, Catellatospora ishikariense, DSM 44718, IFO 14551, IMSNU 22004, JCM 11895, NBRC 14551, strain 6432-C
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