STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY73503.1Protein of unknown function. (118 aa)    
Predicted Functional Partners:
SDY73488.1
Lysophospholipase L1.
 
     0.623
SDY73526.1
Cystathionine beta-synthase.
       0.618
SDY73467.1
Lysophospholipase L1.
 
     0.610
SDZ66143.1
Uncharacterized membrane protein YckC, RDD family.
  
     0.587
SDZ67547.1
Hypothetical protein.
  
     0.543
SDZ66768.1
Hypothetical protein.
  
    0.494
SDY52955.1
Histidine kinase-like ATPase domain-containing protein.
  
     0.452
SDZ52479.1
Hypothetical protein.
  
     0.449
SDZ66149.1
Protein of unknown function.
  
     0.444
SDY73439.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.410
Your Current Organism:
Asanoa ishikariensis
NCBI taxonomy Id: 137265
Other names: A. ishikariensis, Asanoa ishikariensis Lee and Hah 2002, Catellatispora ishikariense, Catellatospora ishikariense, DSM 44718, IFO 14551, IMSNU 22004, JCM 11895, NBRC 14551, strain 6432-C
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