Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY80009.1 | SDY80028.1 | SAMN05421684_1612 | SAMN05421684_1613 | Hypothetical protein. | Peptidase family M28. | 0.815 |
SDY80009.1 | SDY80050.1 | SAMN05421684_1612 | SAMN05421684_1614 | Hypothetical protein. | Transcriptional regulator, ArsR family. | 0.766 |
SDY80009.1 | SDY80063.1 | SAMN05421684_1612 | SAMN05421684_1615 | Hypothetical protein. | Phosphinothricin acetyltransferase. | 0.746 |
SDY80009.1 | SDY80089.1 | SAMN05421684_1612 | SAMN05421684_1616 | Hypothetical protein. | Pyridine nucleotide-disulphide oxidoreductase. | 0.550 |
SDY80009.1 | SDY80097.1 | SAMN05421684_1612 | SAMN05421684_1617 | Hypothetical protein. | Nitrate/nitrite transporter NarK. | 0.550 |
SDY80028.1 | SDY80009.1 | SAMN05421684_1613 | SAMN05421684_1612 | Peptidase family M28. | Hypothetical protein. | 0.815 |
SDY80028.1 | SDY80050.1 | SAMN05421684_1613 | SAMN05421684_1614 | Peptidase family M28. | Transcriptional regulator, ArsR family. | 0.794 |
SDY80028.1 | SDY80063.1 | SAMN05421684_1613 | SAMN05421684_1615 | Peptidase family M28. | Phosphinothricin acetyltransferase. | 0.752 |
SDY80028.1 | SDY80089.1 | SAMN05421684_1613 | SAMN05421684_1616 | Peptidase family M28. | Pyridine nucleotide-disulphide oxidoreductase. | 0.700 |
SDY80028.1 | SDY80097.1 | SAMN05421684_1613 | SAMN05421684_1617 | Peptidase family M28. | Nitrate/nitrite transporter NarK. | 0.629 |
SDY80028.1 | SDY88451.1 | SAMN05421684_1613 | SAMN05421684_2086 | Peptidase family M28. | Enterochelin esterase. | 0.659 |
SDY80028.1 | SDZ34002.1 | SAMN05421684_1613 | SAMN05421684_4675 | Peptidase family M28. | Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase. | 0.660 |
SDY80028.1 | SDZ50893.1 | SAMN05421684_1613 | SAMN05421684_5984 | Peptidase family M28. | Hypothetical protein. | 0.778 |
SDY80028.1 | SDZ50897.1 | SAMN05421684_1613 | SAMN05421684_5985 | Peptidase family M28. | Hypothetical protein. | 0.775 |
SDY80028.1 | SDZ59685.1 | SAMN05421684_1613 | SAMN05421684_6920 | Peptidase family M28. | PLD-like domain-containing protein. | 0.601 |
SDY80050.1 | SDY80009.1 | SAMN05421684_1614 | SAMN05421684_1612 | Transcriptional regulator, ArsR family. | Hypothetical protein. | 0.766 |
SDY80050.1 | SDY80028.1 | SAMN05421684_1614 | SAMN05421684_1613 | Transcriptional regulator, ArsR family. | Peptidase family M28. | 0.794 |
SDY80050.1 | SDY80063.1 | SAMN05421684_1614 | SAMN05421684_1615 | Transcriptional regulator, ArsR family. | Phosphinothricin acetyltransferase. | 0.835 |
SDY80050.1 | SDY80089.1 | SAMN05421684_1614 | SAMN05421684_1616 | Transcriptional regulator, ArsR family. | Pyridine nucleotide-disulphide oxidoreductase. | 0.676 |
SDY80050.1 | SDY80097.1 | SAMN05421684_1614 | SAMN05421684_1617 | Transcriptional regulator, ArsR family. | Nitrate/nitrite transporter NarK. | 0.592 |
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