STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY87648.1Acetyltransferase (GNAT) family protein. (199 aa)    
Predicted Functional Partners:
SDY87662.1
Energy-coupling factor transport system permease protein.
  
    0.677
SDY87680.1
Energy-coupling factor transport system ATP-binding protein.
  
    0.676
SDY87700.1
Energy-coupling factor transport system substrate-specific component.
       0.675
SDZ63651.1
Hypothetical protein.
  
     0.530
SDZ60308.1
Hypothetical protein.
  
     0.529
SDY63619.1
Uncharacterized conserved protein, DUF1778 family.
    
   0.509
SDZ66122.1
Uncharacterized conserved protein, DUF1778 family; Manually curated.
    
   0.509
SDZ51859.1
Cupin domain-containing protein.
 
  
  0.451
SDY87725.1
Pimeloyl-ACP methyl ester carboxylesterase.
       0.425
SDY87726.1
Aminoglycoside 3-N-acetyltransferase.
       0.425
Your Current Organism:
Asanoa ishikariensis
NCBI taxonomy Id: 137265
Other names: A. ishikariensis, Asanoa ishikariensis Lee and Hah 2002, Catellatispora ishikariense, Catellatospora ishikariense, DSM 44718, IFO 14551, IMSNU 22004, JCM 11895, NBRC 14551, strain 6432-C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.