STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ16040.123S rRNA m(1)G-748 methyltransferase. (269 aa)    
Predicted Functional Partners:
SDZ47067.1
Amino acid adenylation domain-containing protein.
     
 0.787
SDZ47170.1
Non-ribosomal peptide synthetase component F.
     
 0.787
SDZ47182.1
Acyl transferase domain-containing protein.
   
 0.730
SDZ59863.1
Non-ribosomal peptide synthase domain TIGR01720.
     
 0.689
add
Adenosine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenosine deaminase subfamily.
       0.648
SDZ44098.1
Polyketide synthase 2/polyketide synthase 5.
    
 0.634
SDZ46930.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
     
 0.592
SDZ46906.1
Natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
     
 0.591
SDZ47176.1
Amino acid adenylation domain-containing protein.
     
 0.583
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.573
Your Current Organism:
Asanoa ishikariensis
NCBI taxonomy Id: 137265
Other names: A. ishikariensis, Asanoa ishikariensis Lee and Hah 2002, Catellatispora ishikariense, Catellatospora ishikariense, DSM 44718, IFO 14551, IMSNU 22004, JCM 11895, NBRC 14551, strain 6432-C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.