Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY55031.1 | SDZ21247.1 | SAMN05421684_0312 | SAMN05421684_3517 | Protein of unknown function. | LPXTG-site transpeptidase (sortase) family protein. | 0.611 |
SDY55031.1 | SDZ21267.1 | SAMN05421684_0312 | SAMN05421684_3519 | Protein of unknown function. | WxL domain surface cell wall-binding. | 0.761 |
SDY60256.1 | SDZ21267.1 | SAMN05421684_0581 | SAMN05421684_3519 | Hypothetical protein. | WxL domain surface cell wall-binding. | 0.531 |
SDY60256.1 | SDZ65209.1 | SAMN05421684_0581 | SAMN05421684_7961 | Hypothetical protein. | Concanavalin A-like lectin/glucanases superfamily protein. | 0.653 |
SDY71825.1 | SDY76406.1 | SAMN05421684_1194 | SAMN05421684_1426 | Hypothetical protein. | Tetratricopeptide repeat-containing protein. | 0.499 |
SDY71825.1 | SDZ21267.1 | SAMN05421684_1194 | SAMN05421684_3519 | Hypothetical protein. | WxL domain surface cell wall-binding. | 0.585 |
SDY71825.1 | SDZ21279.1 | SAMN05421684_1194 | SAMN05421684_3520 | Hypothetical protein. | Protein of unknown function. | 0.532 |
SDY71825.1 | SDZ50832.1 | SAMN05421684_1194 | SAMN05421684_5972 | Hypothetical protein. | Tetratricopeptide repeat-containing protein. | 0.411 |
SDY76406.1 | SDY71825.1 | SAMN05421684_1426 | SAMN05421684_1194 | Tetratricopeptide repeat-containing protein. | Hypothetical protein. | 0.499 |
SDY76406.1 | SDZ21267.1 | SAMN05421684_1426 | SAMN05421684_3519 | Tetratricopeptide repeat-containing protein. | WxL domain surface cell wall-binding. | 0.603 |
SDY76406.1 | SDZ21279.1 | SAMN05421684_1426 | SAMN05421684_3520 | Tetratricopeptide repeat-containing protein. | Protein of unknown function. | 0.494 |
SDY79810.1 | SDZ21267.1 | SAMN05421684_1602 | SAMN05421684_3519 | Alpha-tubulin suppressor. | WxL domain surface cell wall-binding. | 0.514 |
SDZ21247.1 | SDY55031.1 | SAMN05421684_3517 | SAMN05421684_0312 | LPXTG-site transpeptidase (sortase) family protein. | Protein of unknown function. | 0.611 |
SDZ21247.1 | SDZ21267.1 | SAMN05421684_3517 | SAMN05421684_3519 | LPXTG-site transpeptidase (sortase) family protein. | WxL domain surface cell wall-binding. | 0.749 |
SDZ21247.1 | SDZ21279.1 | SAMN05421684_3517 | SAMN05421684_3520 | LPXTG-site transpeptidase (sortase) family protein. | Protein of unknown function. | 0.752 |
SDZ21267.1 | SDY55031.1 | SAMN05421684_3519 | SAMN05421684_0312 | WxL domain surface cell wall-binding. | Protein of unknown function. | 0.761 |
SDZ21267.1 | SDY60256.1 | SAMN05421684_3519 | SAMN05421684_0581 | WxL domain surface cell wall-binding. | Hypothetical protein. | 0.531 |
SDZ21267.1 | SDY71825.1 | SAMN05421684_3519 | SAMN05421684_1194 | WxL domain surface cell wall-binding. | Hypothetical protein. | 0.585 |
SDZ21267.1 | SDY76406.1 | SAMN05421684_3519 | SAMN05421684_1426 | WxL domain surface cell wall-binding. | Tetratricopeptide repeat-containing protein. | 0.603 |
SDZ21267.1 | SDY79810.1 | SAMN05421684_3519 | SAMN05421684_1602 | WxL domain surface cell wall-binding. | Alpha-tubulin suppressor. | 0.514 |
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